PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00007855-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family FAR1
Protein Properties Length: 255aa    MW: 29384.3 Da    PI: 7.7451
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00007855-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.91.2e-11581233190
                   FAR1  31 rtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                            ++f+  +eg + ++kk+      ++k rr++++tr gCka+++ ++++dg+++ t++++ HnH+l+
  SMil_00007855-RA_Salv  58 YEFYSIREGVKPDSKKDilessvQKKIRRRKPSTRNGCKARITTTLNDDGNYVFTSFSELHNHSLV 123
                            7899999***9999999****9999999************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.7E-958123IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MLEFCCTNSQ ANEAVKMAVS DDVNNHVDFR RPHSYLPICE DSKKPYVGKV FKTLDEAYEF  60
YSIREGVKPD SKKDILESSV QKKIRRRKPS TRNGCKARIT TTLNDDGNYV FTSFSELHNH  120
SLVTEDVRHL MKFNRKMDES HQMIMLKCAK SNIGPVRAFR IFKELVGSFE EVGCTSKDFK  180
NLSYTMNSYA DGVDAQLLLD RFLSKRETDE CFKCEYLVDE THKVKSLFWS DAVAVQNYSL  240
FGDAVSFDAT YTTNR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA3136228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-23FAR1-related sequence 5